BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036E07LP1|AL430244
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig208 1473 0.0
3x_Contig1722 212 9e-55
3x_Contig1771 159 1e-38
3x_Contig1747 159 1e-38
3x_Contig1684 159 1e-38
3x_Contig1564 159 1e-38
3x_Contig1444 159 1e-38
3x_Contig753 155 2e-37
3x_Contig1799 121 3e-27
>3x_Contig208
Length = 1357
Score = 1473 bits (743), Expect = 0.0
Identities = 750/751 (99%), Gaps = 1/751 (0%)
Strand = Plus / Minus
Query: 157 cagttggttaaggcaccgtgctaataacgcggggatcagcggttcgatcccgctaggaac 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1357 cagttggttaaggcaccgtgctaataacgcggggatcagcggttcgatcccgctaggaac 1298
Query: 217 cattatttttatcgctctctatttttggctcagtttattatttgacaagtactagtgtct 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1297 cattatttttatcgctctctatttttggctcagtttattatttgacaagtactagtgtct 1238
Query: 277 gtggaaagcctaatatataagcctcgcggaaacagcagccgagaaaacgcagttggnctt 336
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1237 gtggaaagcctaatatataagcctcgcggaaacagcagccgagaaaacgcagttgg-ctt 1179
Query: 337 gcaactattttttcatctttccataaattacgctagttagtacaatattgttcaaaatct 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1178 gcaactattttttcatctttccataaattacgctagttagtacaatattgttcaaaatct 1119
Query: 397 ctgctattcttctgagacgagacttggttacacatatatatgtatttggggtatctatat 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1118 ctgctattcttctgagacgagacttggttacacatatatatgtatttggggtatctatat 1059
Query: 457 tgaatcaccttctctttttgaaaccggagtaggagttatactttctatatctatcgtttg 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 tgaatcaccttctctttttgaaaccggagtaggagttatactttctatatctatcgtttg 999
Query: 517 agggttgatatgagctgctcccataacgaggaatattgacgttaggatttcttgggaaat 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 agggttgatatgagctgctcccataacgaggaatattgacgttaggatttcttgggaaat 939
Query: 577 ctaacggatgtgatctcgttggttttggtggtaaaactttacccttgactgtaggagcag 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 ctaacggatgtgatctcgttggttttggtggtaaaactttacccttgactgtaggagcag 879
Query: 637 gtgcgtttgatgagccattactgtgattatagttggaccttttggactttttgttatatg 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 gtgcgtttgatgagccattactgtgattatagttggaccttttggactttttgttatatg 819
Query: 697 gaggagcataaaagttagatggctttgcatcaccgtagtccatagctggttgtttcttat 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 gaggagcataaaagttagatggctttgcatcaccgtagtccatagctggttgtttcttat 759
Query: 757 ttttgttattattataatagtagttatcctcaccgtcatagttgaaatcgtaggtgtcat 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 ttttgttattattataatagtagttatcctcaccgtcatagttgaaatcgtaggtgtcat 699
Query: 817 agtcatagtcgtcatatgtgtactcgtttgccgtcctctctttgtattctttcaaattcc 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 agtcatagtcgtcatatgtgtactcgtttgccgtcctctctttgtattctttcaaattcc 639
Query: 877 tgccataatcctgccttacagatgacggaag 907
|||||||||||||||||||||||||||||||
Sbjct: 638 tgccataatcctgccttacagatgacggaag 608
>3x_Contig1722
Length = 17718
Score = 212 bits (107), Expect = 9e-55
Identities = 125/131 (95%)
Strand = Plus / Plus
Query: 1 atccatctatgccatccctctggataccacaggatccatatgcccagtcactgacgtctt 60
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2048 atccatctaggtcatccctctggataccacaggatccatatgcccagtcactgacgtctt 2107
Query: 61 ggaactctgccgtgtgctggctagcccacatgacctctcgtctggcttgtcctcagtcta 120
||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||
Sbjct: 2108 ggaactctgccgtgtgctggctagctcacatgacctctcgtctggcttgtcttaagtcta 2167
Query: 121 tattacgacat 131
| |||||||||
Sbjct: 2168 tcttacgacat 2178
>3x_Contig1771
Length = 25932
Score = 159 bits (80), Expect = 1e-38
Identities = 83/84 (98%)
Strand = Plus / Plus
Query: 143 ttggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcagcggttcg 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12901 ttggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcagcggttcg 12960
Query: 203 atcccgctaggaaccattattttt 226
|||||||||||||||||| |||||
Sbjct: 12961 atcccgctaggaaccattcttttt 12984
>3x_Contig1747
Length = 15671
Score = 159 bits (80), Expect = 1e-38
Identities = 83/84 (98%)
Strand = Plus / Plus
Query: 143 ttggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcagcggttcg 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7677 ttggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcagcggttcg 7736
Query: 203 atcccgctaggaaccattattttt 226
|||||||||||||||||| |||||
Sbjct: 7737 atcccgctaggaaccattcttttt 7760
>3x_Contig1684
Length = 14609
Score = 159 bits (80), Expect = 1e-38
Identities = 83/84 (98%)
Strand = Plus / Minus
Query: 143 ttggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcagcggttcg 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9547 ttggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcagcggttcg 9488
Query: 203 atcccgctaggaaccattattttt 226
|||||||||||||||||| |||||
Sbjct: 9487 atcccgctaggaaccattcttttt 9464
>3x_Contig1564
Length = 11038
Score = 159 bits (80), Expect = 1e-38
Identities = 83/84 (98%)
Strand = Plus / Minus
Query: 144 tggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcagcggttcga 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5415 tggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcagcggttcga 5356
Query: 204 tcccgctaggaaccattattttta 227
||||||||||||||||| ||||||
Sbjct: 5355 tcccgctaggaaccattcttttta 5332
>3x_Contig1444
Length = 7580
Score = 159 bits (80), Expect = 1e-38
Identities = 83/84 (98%)
Strand = Plus / Plus
Query: 143 ttggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcagcggttcg 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5666 ttggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcagcggttcg 5725
Query: 203 atcccgctaggaaccattattttt 226
|||||||||||||||||| |||||
Sbjct: 5726 atcccgctaggaaccattcttttt 5749
>3x_Contig753
Length = 2743
Score = 155 bits (78), Expect = 2e-37
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 143 ttggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcagcggttcg 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1988 ttggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcagcggttcg 2047
Query: 203 atcccgctaggaaccatt 220
||||||||||||||||||
Sbjct: 2048 atcccgctaggaaccatt 2065
>3x_Contig1799
Length = 39855
Score = 121 bits (61), Expect = 3e-27
Identities = 89/97 (91%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 1 atccatctatgccatccct-ctggataccacaggatccatatgcccagtcactgacgtct 59
||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 29744 atccatctaggccttcccttctggataccacaggatccatatgcccagtcactgacgtct 29685
Query: 60 tggaactctgccgtgtgctggctagcccacatgacct 96
||||||||||||| | | ||| |||| ||||||||||
Sbjct: 29684 tggaactctgccgagcgttggatagctcacatgacct 29648
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6347
Number of Sequences: 1807
Number of extensions: 6347
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 9
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)